Brain stimulation research at Northwestern

Brain imaging for
targeted brain stimulation.

Two people with the same diagnosis can have symptoms coming from different circuits. And any given circuit shifts position from one brain to the next. We build the tools that find those circuits in an individual — and the treatments that act on them.

Functional MRICausal network mappingRandomized trials

01 / Research · method

Mapping circuits,
testing targets.

Most of what we do is working out which circuit a symptom actually sits on. That is a neuroimaging problem before it is a treatment one, and it is worth doing whether or not a stimulation target comes out the other end. When one does, the arc below is how we get there — and how we check the extra effort was worth it.

  1. 01 · EVIDENCE

    Start from causal evidence

    Brain damage that causes a symptom, and stimulation sites that relieve it, land in different places in different people. That scatter is the starting data, not noise to be averaged away.

    Lesions · DBS sites · TMS sites

  2. 02 · ANALYSIS

    Map it with the imaging

    This is the bulk of the work: connectivity mapping, individualised network estimation, normative modelling, and the methods development underneath all of it. Plenty of these analyses are the finding — no coil required.

    Functional connectivity · precision mapping · normative models

  3. 03 · TARGET

    Find where it surfaces

    Where the work does point at treatment: stimulation only reaches a few centimetres in, so we follow the circuit to cortex a coil can actually reach. That point is rarely the one a tape measure gives you.

    Cortical surface · within coil reach

  4. 04 · TRIAL

    Test it against the standard

    An imaging-derived target is only worth the scan time if it beats the scalp measurement clinics use today. So the targets get randomized head to head, and we report it either way.

    Randomized · blinded · head-to-head

Not every project runs the whole arc. A good deal of what we publish stops at the mapping — new methods, new circuits, or a negative result about somebody else's target — and that is a finding in its own right.

The papers behind each stage

02 / Research · strands

Three strands
of the work.

Psychiatric symptoms can involve different brain circuits even within the same diagnosis. We study those circuits to understand where to stimulate, how to reach the target, and whether targeting it changes what happens to patients.

Neuroimaging & neuroinformatics

Functional MRI, causal network mapping, and precision imaging used to locate targets. We trace connections from regions implicated in a symptom out to cortical sites that stimulation can reach, and build the tooling that makes that repeatable across datasets.

Functional connectivity
Causal network mapping
Targeting methods

Clinical trials

Imaging-guided stimulation — primarily TMS — compared against conventional targeting in randomized designs. The work spans depression, bipolar disorder, OCD, PTSD, psychosis, anxiety, and addiction rather than a single diagnosis.

MRI-guided TMS
Randomized comparisons
Transdiagnostic symptoms

Getting it into clinics

A target that only works in a research scanner has not helped anyone. We publish the maps and code, and work on what it would take for a clinician with an ordinary scanner and an ordinary coil to use this.

Open maps & code
Reproducible pipelines
Clinical translation

Research profile at Northwestern

Take part

We are looking for people to take part in a study.

A study at Northwestern is enrolling adults with depression, anxiety, OCD, or schizophrenia to look at how TMS affects symptoms that cut across those diagnoses. Taking part involves brain imaging and a course of stimulation.

Registry
NCT06376734
Conditions
Depression · Anxiety · OCD · Schizophrenia
Involves
MRI and a course of TMS
Site
Northwestern University, Chicago

03 / People

The people
behind the work.

Neuroimaging, computational methods, experimental psychology, and clinical psychiatry, split between Chicago and a continuing team in Boston.

Shan Siddiqi

Group lead

Shan Siddiqi, MD

Stephen M. Stahl Associate Professor of Psychiatry

Scientific Director, Dauten Bipolar Center of Excellence

Faculty profile

“Our work focuses on causal mapping of human brain function and dysfunction in mental illness. We map the circuits that link brain lesions and brain stimulation sites affecting psychiatric symptoms — circuits that can then be targeted with treatments such as TMS and deep brain stimulation.”

Adam PinesAssistant Professor · Imaging lead
Simon KwonResearch Associate
Suman PremkumarLab Manager
Mohammad LesanpazeshkiStudy Physician
Dylan DuesResearch-track Resident
Gaelle RachedChild/Adolescent Psychiatry Fellow
Sydney MyersMD/PhD Student
Sofia VejlkovicResearch Assistant
Oscar AguilarResearch Assistant
Twelve more in BostonChicago, Boston & alumni ↗

04 / Publications

Selected papers.

More on PubMed
Depression circuit maps from the study.

Nature Human Behaviour · 2021

Brain stimulation and brain lesions converge on common causal circuits in neuropsychiatric disease

Siddiqi SH et al.

Damage that causes a symptom and stimulation that relieves it land on the same circuit — the observation the whole targeting method rests on.

Comparison of lesion, TMS, and DBS connectivity maps.

Nature Reviews Neuroscience · 2022

Causal mapping of human brain function

Siddiqi SH, Kording KP, Parvizi J, Fox MD

The framework behind the rest of this list: lesions, stimulation, and imaging treated as three views of one causal question.

Brain circuit figure from the PTSD study.

Nature Neuroscience · 2024

A potential target for noninvasive neuromodulation of PTSD symptoms derived from focal brain lesions in veterans

Siddiqi SH et al.

A candidate PTSD target derived from focal brain damage in a veteran cohort.

Lesions and their shared connections in the psychosis study.

JAMA Psychiatry · 2025

Mapping Lesions That Cause Psychosis to a Human Brain Circuit and Proposed Stimulation Target

Pines AR et al.

Carries the method past mood disorders: a psychosis circuit, and a target that follows from it.

The convergent anxiety circuit.

American Journal of Psychiatry · 2026

Convergent Network Localization of Brain Stimulation Targets for Trait Anxiety

Siddiqi SH et al.

Anxiety targets converge somewhere distinct from the depression circuit — which is what makes treating the two separately a real option.

Brain stimulation targets and their relative effects on anxiety and depression.

Molecular Psychiatry · 2026

Circuit-targeted modulation of anxiety symptoms in individuals with major depression: A randomized head-to-head TMS trial

Taylor JJ et al.

Tests the previous result in people: does moving the target change which symptom improves?

The imaging-based targeting workflow for the depression circuit.

JAMA Psychiatry · 2026

Connectivity- vs Scalp-Based Targeting of Accelerated Transcranial Magnetic Stimulation for Depression: A Randomized Clinical Trial

Taylor JJ et al.

The trial stage in practice: imaging-based targeting put directly against the scalp measurement clinics use now.

More from the group

Grouped by the kind of question rather than by year — a good share of it never involves a coil. Pick a category to narrow the list.

Causal circuit mapping lesions and stimulation sites → circuits

Nature human behaviour · 2023

A transdiagnostic network for psychiatric illness derived from atrophy and lesionsTaylor JJ, Lin C, Talmasov D, Ferguson MA, Schaper FLWVJ, Jiang J, Goodkind M, Grafman J, Etkin A, Siddiqi SH, Fox MD

Biological psychiatry · 2024

Mapping Lesion-Related Human Aggression to a Common Brain NetworkPeng S, Schaper FLWVJ, Cohen-Zimerman S, Miller GN, Jiang J, Rouhl RPW, Temel Y, Siddiqi SH, Grafman J, Fox MD, Cohen AL

Biological psychiatry · 2026

Dysfunctional Brain Circuits Overlap in Lesional and Idiopathic Obsessive-Compulsive DisorderCotovio G, Descalço N, Caballero-Insaurriaga J, Martins DR, Faro Viana F, Fonseca C, Ramos J, Santos B, Maia A, Oliveira J, Loução N, Barbour T, Siddiqi SH, Fox MD, Barahona-Corrêa JB, Oliveira-Maia AJ

Annals of neurology · 2026

A Human Gait Circuit Derived from Brain Lesions and Deep Brain StimulationLuo L, Schaper FLWVJ, Nguyen M, Garimella AH, Jabbour S, Hsu J, Soussand L, Lin C, Siddiqi SH, Butenko K, Horn A, Reich MM, Volkmann J, Kühn AA, Corbetta M, Alterman RL, Fox MD

medRxiv · 2025Preprint

Deep brain stimulation and psychosis: A case series and two candidate causal brain circuitsMeyer GM, Pines AR, Roldan A, Aracil-Bolaños I, Settle EG, Sahin IA, Schaper FLWVJ, Neudorfer C, Järvenpää S, Kamo H, Piacentini SHMJ, Romito LM, Kim MJ, Goede LL, Butenko K, Bahners BH, Mosley PE, Rainha Campos A, Olaciregui Dague K, Boyd J, Widge AS, Dougherty DD, Temel Y, Rouhl RPW, Colon A, Kühn A, Maarouf M, Macerollo A, Farah JO, Oyama G, Hattori N, Lehtimäki K, Peltola J, Akram H, Foltynie T, Zhang C, Silbersweig D, Fox MD, Rolston JD, Aibar-Durán JA, Corripio I, Siddiqi SH, Horn A

medRxiv · 2025Preprint

Obsessive-compulsive disorder secondary to focal brain lesions: from lesions to networksCotovio G, Descalco N, Caballero-Insaurriaga J, Martins D, Faro Viana F, Fonseca C, Ramos J, Maia A, Oliveira J, Loucao N, Siddiqi SH, Fox MD, Barahona-Correa JB, Oliveira-Maia AJ

medRxiv · 2025Preprint

A Multi-Symptom Circuit Architecture of Obsessive-Compulsive DisorderHollunder B, Meyer GM, Li N, Reinhardt P, Sahin IA, Rajamani N, Pijar J, Nombela C, Mosley P, Acevedo N, Johnson KA, Provenza N, Akram H, Borron BM, Chou T, Germann J, Castaño Montoya JP, Strange B, Barcia JA, Tyagi H, Castle DJ, Rossell S, Bosanac P, Finke C, Kühn AA, Servello D, Bona AR, Porta M, Mogilner AY, Pourfar MH, Ostrem JL, Kuhn J, Visser-Vandewalle V, Chabardes S, Sheth SA, Goodman WK, Smith AH, Choi KS, Kopell BH, Mayberg HS, Figee M, Foltynie T, Limousin P, Ackermans L, de Jong JJA, Leentjens AFG, Butson CR, Okun MS, Richardson RM, Cosgrove GR, Dougherty DD, Siddiqi SH, Lozano AM, Zrinzo L, Joyce E, Polosan M, Neudorfer C, Baldermann JC, Fox MD, Horn A

medRxiv · 2025Preprint

Lesion network localization of functional and somatic symptomsMilano BA, Palm S, Burke MJ, Drew W, Kletenik I, Pines A, Corbetta M, Grafman J, Downar J, Siddiqi SH

bioRxiv · 2026Preprint

Non-invasive Neuromodulation Targeting Approach by Mapping Stimulations and Lesions That Modify Visual MemoryKwon S, Lee S, Siegel JS, Chiulli N, Freedberg M, Hebscher M, Hendrikse J, Hermiller MS, Ji GJ, Tambini A, Ye E, Cohen-Zimerman S, Corbetta M, Grafman J, Voss JL, Siddiqi SH

Imaging methods & analysis how the maps get made, and whether they hold

Journal of neuropathology and experimental neurology · 2026

An open-source application for automated quantification of Ki-67 proliferative index in meningiomasRaquib AR, Schwartz SN, Siddiqi SH, Varma H

AJNR. American journal of neuroradiology · 2026

Improved Reliability of Resting-State fMRI Connectivity Using Multi-Echo Acquisition: Implications for Personalized Transcranial Magnetic Stimulation TargetingHassanzadeh E, Tariq R, Palm S, Chiulli N, Lawson D, Khosravani S, Barbour T, Kong R, Yeo BTT, Fox MD, Siddiqi SH

bioRxiv · 2026Preprint

Excessive Censoring Degrades Individual-Specific Cortical Parcellations and Personalized TMS TargetsTan TWK, Kong R, Xue A, Cheng J, Burgher B, Cocchi L, Siddiqi SH, Nichols TE, Mejia AF, Tor PC, Yeo BTT

Science translational medicine · 2023

Precision functional MRI mapping reveals distinct connectivity patterns for depression associated with traumatic brain injurySiddiqi SH, Kandala S, Hacker CD, Bouchard H, Leuthardt EC, Corbetta M, Morey RA, Brody DL

Molecular psychiatry · 2025

Predictive value of subgenual cingulate normative connectivity to TMS treatment site for antidepressant response in routine clinical practice: a prospective, multisite cohort studyKhosravani S, Palm ST, Drew W, Frandsen SB, Lin C, Tirrell E, Hindley L, Schineller M, Garimella A, Chiulli N, Lawson D, Jones E, Press DZ, Stern AP, Brown JC, Barbour TA, Taylor JJ, Carpenter LL, Siddiqi SH, Fox MD

Brain stimulation · 2026

Proximity to an SGC-DLPFC individualized functional target and electric-field modeling do not predict clinical outcomes of rTMS for treatment-resistant depressionGregory E, Siddiqi SH, Fox MD, Blumberger DM, Downar J, Daskalakis ZJ, Dunlop K, Vila-Rodriguez F

Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2025

Using causal network mapping to clarify pre-clinical brain stimulation resultsWebler RD, King D, Balderston NL, Siddiqi SH

Scientific reports · 2023

Individualized precision targeting of dorsal attention and default mode networks with rTMS in traumatic brain injury-associated depressionSiddiqi SH, Kandala S, Hacker CD, Trapp NT, Leuthardt EC, Carter AR, Brody DL

Neuroinformatics · 2022

How Machine Learning is Powering Neuroimaging to Improve Brain HealthSingh NM, Harrod JB, Subramanian S, Robinson M, Chang K, Cetin-Karayumak S, Dalca AV, Eickhoff S, Fox M, Franke L, Golland P, Haehn D, Iglesias JE, O'Donnell LJ, Ou Y, Rathi Y, Siddiqi SH, Sun H, Westover MB, Whitfield-Gabrieli S, Gollub RL

Targeting & stimulation methods where to aim, and with what

Clinical trials & outcomes what happens when it reaches a patient

Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026

Target engagement in a head-to-head clinical trial of dysphoric versus anxiosomatic transcranial magnetic stimulation targetsBaldi S, Lin C, Li J, Frandsen S, Jones E, Palm S, Greene AS, Taylor JJ, Fox MD, Siddiqi SH

Brain stimulation · 2026

Circuit-informed targeting for psychiatric comorbidity in depression: An accelerated TMS pilot studySanderson LL, Chandra A, Jones E, Bomer L, Hall N, Kare MR, Lawson D, Chiulli N, Webler RD, Baratono SR, Gonsalvez I, Lyndon S, Fox MD, Siddiqi SH, Taylor JJ

Brain stimulation · 2025

Accelerated anxiosomatic circuit TMS: An open-label pilot study in Chinese participants with a treatment-resistant anxiety-related disorderCui H, Webler RD, Xu L, Qian Z, Tang Y, Zhang T, Li C, Siddiqi SH, Wang J

Contemporary clinical trials · 2025

Expedition for new symptom-specific TMS targets: Protocol for the first randomized causal circuit mapping trialAquadro E, Bomer L, Webler R, Pines A, DeSouza DD, Carreon D, Chiulli N, Frandsen S, Taylor JJ, Siddiqi SH

Acta psychiatrica Scandinavica · 2026

Transcranial Magnetic Stimulation Retreatment for Recurrent Depression: A Large Real-World Multisite Cohort StudyLyndon S, Gibbons JB, Straub L, Sung M, Jameson JC, Hathaway DB, Mulcahy DH, Elliott C, Wood R, Ruble M, Szmulewicz AG, Yang J, Aldis R, Wyss R, Wang PS, Siddiqi SH

Brain stimulation · 2024

Accelerated 1 Hz dorsomedial prefrontal transcranial magnetic stimulation for generalized anxiety disorder in adolescents and young adults: A case seriesCroarkin PE, Dojnov A, Middleton VJ, Bowman J, Kriske J, Donachie N, Siddiqi SH, Downar J

Brain stimulation · 2023

Differential response to H-coil repetitive transcranial magnetic stimulation before versus after the first COVID-19 shutdownBecker CR, Taylor JJ, Brown JC, Seiner SJ, Siddiqi SH

Journal of affective disorders · 2024

Older age associated with better antidepressant response to H1-coil transcranial magnetic stimulation in female patientsKryatova MS, Seiner SJ, Brown JC, Siddiqi SH

Journal of affective disorders · 2024

Cognitive effects of electroconvulsive therapy in depressed adolescentsGhaziuddin N, McClintock SM, Maixner DF, Miller LR, Husain M, Wachtel LE, Siddiqi SH, Flood M, Weinstein S, Frye MA, Weiner RD

Psychopharmacology · 2025

History of episodic heavy alcohol use predicts antidepressant effectiveness of ketamineRaquib AR, Nguyen V, Brown JC, Sedgewick AE, Seiner S, Taylor JJ, Siddiqi SH, Meisner RC

Circuits beyond psychiatry neurology, memory, behaviour

JAMA neurology · 2023

Mapping Lesion-Related Epilepsy to a Human Brain NetworkSchaper FLWVJ, Nordberg J, Cohen AL, Lin C, Hsu J, Horn A, Ferguson MA, Siddiqi SH, Drew W, Soussand L, Winkler AM, Simó M, Bruna J, Rheims S, Guenot M, Bucci M, Nummenmaa L, Staals J, Colon AJ, Ackermans L, Bubrick EJ, Peters JM, Wu O, Rost NS, Grafman J, Blumenfeld H, Temel Y, Rouhl RPW, Joutsa J, Fox MD

Journal of neurology · 2023

Multiple sclerosis lesions that impair memory map to a connected memory circuitKletenik I, Cohen AL, Glanz BI, Ferguson MA, Tauhid S, Li J, Drew W, Polgar-Turcsanyi M, Palotai M, Siddiqi SH, Marshall GA, Chitnis T, Guttmann CRG, Bakshi R, Fox MD

Brain : a journal of neurology · 2025

Effects of focal brain damage on political behaviour across different political ideologiesSiddiqi SH, Balters S, Zamboni G, Cohen-Zimerman S, Grafman JH

The Journal of neuropsychiatry and clinical neurosciences · 2023

Focal Lesion in the Intraparietal Sulcus: A Case for Network-Dependent Release HallucinationsWang Y, Pines AR, Yoon JY, Frandsen SB, Miyawaki EK, Siddiqi SH

Molecular psychiatry · 2026

Atrophy in preclinical Alzheimer's disease maps to a network that predicts longitudinal declineLee S, Baratono SR, Ha J, Burt GT, Palm ST, Drew WJ, Zide BS, Chiulli NM, Lariviere S, Zhang S, Yeo BTT, Fox MD, Sperling RA, Donovan NJ, Siddiqi SH

The American journal of geriatric psychiatry : official journal of the American Association for Geriatric Psychiatry · 2024

Specific Association of Worry With Amyloid-β But Not Tau in Cognitively Unimpaired Older AdultsLee S, Zide BS, Palm ST, Drew WJ, Sperling RA, Jacobs HIL, Siddiqi SH, Donovan NJ

Nature. Mental health · 2023

Lesion network localization of depression in multiple sclerosisSiddiqi SH, Kletenik I, Anderson MC, Cavallari M, Chitnis T, Glanz BI, Khalil S, Palotai M, Bakshi R, Guttmann CRG, Fox MD

Nature medicine · 2022

Brain lesions disrupting addiction map to a common human brain circuitJoutsa J, Moussawi K, Siddiqi SH, Abdolahi A, Drew W, Cohen AL, Ross TJ, Deshpande HU, Wang HZ, Bruss J, Stein EA, Volkow ND, Grafman JH, van Wijngaarden E, Boes AD, Fox MD

Reviews, commentary & the field framing, argument, and where this is going

Biological psychiatry · 2022

Bringing Human Brain Connectomics to Clinical Practice in PsychiatrySiddiqi SH, Taylor JJ, Horn A, Fox MD

Biological psychiatry · 2023

Targeting Symptom-Specific Networks With Transcranial Magnetic StimulationSiddiqi SH, Fox MD

Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2023

The future of brain circuit-targeted therapeuticsSiddiqi SH, Khosravani S, Rolston JD, Fox MD

The American journal of psychiatry · 2023

Converging Evidence for Frontopolar Cortex as a Target for Neuromodulation in Addiction TreatmentSoleimani G, Joutsa J, Moussawi K, Siddiqi SH, Kuplicki R, Bikson M, Paulus MP, Fox MD, Hanlon CA, Ekhtiari H

Biological psychiatry · 2024

Critically Assessing the Unanswered Questions of How, Where, and When to Induce Plasticity in the Posttraumatic Stress Disorder Network With Transcranial Magnetic StimulationBrown JC, Kweon J, Sharma P, Siddiqi SH, Isserles M, Ressler KJ

The American journal of psychiatry · 2026

Circuit-Targeted TMS for PTSD: Where, When, How, and for Whom?Webler RD, Brown JC, Siddiqi SH

The American journal of psychiatry · 2023

Hitting the Target of Image-Guided Psychiatry?Siddiqi SH, Philip NS

Nature medicine · 2024

An ancient psychedelic for traumatic brain injuryBrody DL, Siddiqi SH

Brain stimulation · 2025

Towards accredited clinical training in brain stimulation: Proceedings from the brain stimulation subspecialty summitsSiddiqi SH, Chen L, Trapp NT, Bukhari-Parlakturk N, Taylor JJ, Boes AD, Brown JC, Barbour T, Camprodon JA, Fox MD, Kopell BH, MacMillan C, Fasano A, Fisher RS, Nahas Z, Revuelta GJ, Riva-Posse P, Rolston JD, Scangos K, Shafi MM, Smith AH, Wong J, Halpern CH, Mayberg HS, Williams NR

Cortex; a journal devoted to the study of the nervous system and behavior · 2023

Lesion voxels to lesion networks: The enduring value of the Vietnam Head Injury StudyHoward CW, Ferguson MH, Siddiqi SH, Fox MD

05 / Open research

Data and code.

Brain maps, analysis methods, and source code from seven studies, with more added as the work develops. If a target is real, someone else should be able to find it in their own data.

06 / Join the lab

Join the group.

We are interested in people who work in neuroimaging, data science, experimental psychology, and clinical research — and in people who are careful about methods, argue in the open, and would rather find out a result is wrong early than late.

Get in touch Read the lab guide first

Research opportunities and collaboration

suman.premkumar@northwestern.edu

Tell us your background, what you want to work on, and what you would want to be doing in two years.

Northwestern University
Feinberg School of Medicine
Chicago, Illinois